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SchemaRefinery

Tool to refine cg/wgMLST Schemas.

Description

SchemaRefinery is a bioinformatics tool designed to refine cgMLST and wgMLST schemas for bacterial genomics. It provides functionalities to process, analyze, and visualize genomic data, making it easier for researchers to work with large-scale genomic datasets.

Installation

To install SchemaRefinery, you can use pip:

pip install .

Usage

After installation, you can use the SchemaRefinery command-line tool. For example:

SchemaRefinery --help

This will display the help message with available commands and options.

Development

To contribute to the development of SchemaRefinery, you can clone the repository and install the development dependencies:

git clone https://github.com/MForofontov/Schema_Refinery.git
cd Schema_Refinery
pip install -r requirements.txt

Authors

  • Mykyta Forofontov
  • Rafael Mamede
  • Mário Ramirez

Maintainers

License

SchemaRefinery is licensed under the GNU General Public License v3 (GPLv3). See the LICENSE file for more details.

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