pyproject.toml

[tool.poetry]
name = "lifewatch-pypam"
version = "0.3.0"
description = 'Facilitate acoustic processing from underwater acoustic recorders'
authors = ["Clea Parcerisas <cleap@vliz.be>"]
readme = "README.md"
repository = "https://github.com/lifewatch/pypam.git"
packages = [{include = "pypam"}]
license = "GPL-3.0-or-later"
classifiers =[
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent"]

[tool.poetry.dependencies]
python = ">=3.9, <3.12.0"
matplotlib = "^3.7.1"
numpy = "^1.24.3"
pandas = "^2.0.2"
seaborn = "0.13.0"
soundfile = "^0.12.1"
tqdm = "^4.65.0"
numba = "^0.57.0"
noisereduce = "^2.0.1"
scikit-learn = "^1.2.2"
python-dateutil = "^2.8.2"
poetry = "^1.5.0"
xarray = "2023.8.0"
pyhydrophone = "^0.1.7"

# Development tools
pre-commit = {version = "^3.3.1", optional = true}
isort = {version = "^5.12.0", optional = true}
black = {version = ">=23.3,<25.0", optional = true}

# Testing tools
pyyaml = {version = "^6.0", optional = true}
pytest = {version = "^7.3.1", optional = true}
coverage = {version = "^7.2.5", optional = true}
python-dotenv = {version = "^1.0.0", optional = true}
pytest-cov = {version = "^4.1.0", optional = true}

# Documentation tools

# Poetry has the dependecies groups, but those are not 
#   compatible with extras, widely used in the python-verse.
netcdf4 = "^1.6.4"
syrupy = "^4.0.4"
openpyxl = "^3.1.2"
scikit-maad = "^1.4.0"
setuptools = "^68.1.0"
certifi = "^2023.7.22"
cryptography = ">=41.0.2,<43.0.0"
dask = {version = "^2023.9.3", optional = true}
[tool.poetry.extras]
dev = ["pre-commit", "isort", "black", "flake8"]
tests = ["pyyaml","pytest", "coverage", "python-dotenv", "pytest-cov"]
docs = ["sphinx"]

[tool.poetry.group.docs.dependencies]
sphinx = "6.1.2"
numpydoc = "^1.5.0"
sphinx-rtd-theme = "^1.2.2"
sphinx-gallery = "^0.13.0"

[build-system]
requires = ["setuptools","poetry"]
build-backend = "poetry.core.masonry.api"

[tool.black]
line-length = 79

[tool.isort]
multi_line_output = 3
include_trailing_comma = true

[tool.pytest.ini_options]
testpaths = ["tests",]
pythonpath = ["."]