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@MaayanLab

Ma'ayan Lab

Developing Computational Methods to Study the Complexity of Regulatory Networks in Mammalian Cells

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  1. appyter appyter Public

    jinja2-enabled jupyter notebooks

    Python 36 6

  2. appyter-catalog appyter-catalog Public

    A catalog of appyter notebooks

    Jupyter Notebook 35 44

  3. archs4 archs4 Public

    ARCHS4 RNA-seq processing scripts and web server pages.

    JavaScript 54 11

Repositories

Showing 10 of 376 repositories
  • DRC-Portals Public
    MaayanLab/DRC-Portals’s past year of commit activity
    TypeScript 0 0 30 7 Updated Feb 23, 2025
  • CFDECoauthorNetwork Public Forked from MaayanLab/Knowledge-Graph-UI

    A fork to create the CFDECoauthorNetwork.

    MaayanLab/CFDECoauthorNetwork’s past year of commit activity
    JavaScript 0 13 4 0 Updated Feb 22, 2025
  • ChEA-KG-UI Public Forked from MaayanLab/Knowledge-Graph-UI

    Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighbors as well as shortest paths between two entities. Additionally, the API can be extended to add other functions such as enrichment analysis, and specialized queries.

    MaayanLab/ChEA-KG-UI’s past year of commit activity
    TypeScript 0 GPL-3.0 13 0 0 Updated Feb 20, 2025
  • Knowledge-Graph-UI Public

    Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighbors as well as shortest paths between two entities. Additionally, the API can be extended to add other functions such as enrichment analysis, and specialized queries.

    MaayanLab/Knowledge-Graph-UI’s past year of commit activity
    JavaScript 7 13 5 1 Updated Feb 20, 2025
  • archs4dx Public
    MaayanLab/archs4dx’s past year of commit activity
    JavaScript 0 Apache-2.0 0 7 0 Updated Feb 20, 2025
  • archs4r Public

    R package to load and query ARCHS4 data in R

    MaayanLab/archs4r’s past year of commit activity
    R 1 Apache-2.0 0 0 0 Updated Feb 19, 2025
  • dokku Public

    Ma'ayanlab dokku server admin and user guide

    MaayanLab/dokku’s past year of commit activity
    Shell 2 0 0 1 Updated Feb 14, 2025
  • blitzgsea Public

    Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for accurate p-value estimation.

    MaayanLab/blitzgsea’s past year of commit activity
    Jupyter Notebook 41 Apache-2.0 9 1 0 Updated Feb 14, 2025
  • datacrosswaysarchs4 Public
    MaayanLab/datacrosswaysarchs4’s past year of commit activity
    Python 0 Apache-2.0 0 1 0 Updated Feb 12, 2025
  • GeneSetCart Public

    GeneSetCart is an interactive web-based platform that enables investigators to gather gene sets from various sources; augment these sets with gene-gene co-expression correlations and protein-protein interactions; perform set operations on these sets such as union, consensus, and intersection; and visualize and analyze these gene sets.

    MaayanLab/GeneSetCart’s past year of commit activity
    TypeScript 0 GPL-3.0 0 4 0 Updated Feb 10, 2025
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